Колпащиков Дмитрий Михайлович

Статья

Kolpashchikov D.M., Spelkov A.A. Binary (Split) Light-up Aptameric Sensors. Angewandte Chemie - International Edition. 2020. pp. In Press.

Статья

Nedorezova D.D., Fakhardo A.F., Molden T.A., Kolpashchikov D.M. Deoxyribozyme-based DNA Machines for Cancer Therapy. ChemBioChem. 2020. Vol. 21. No. 5. pp. 607-611.

Статья

Spelkov A.A., Goncharova E.A., Savin A.M., Kolpashchikov D.M. Bifunctional RNA-Targeting Deoxyribozyme Nanodevice as a Potential Theranostic Agent. Chemistry - A European Journal. 2020. Vol. 26. No. 16. pp. 3489-3493.

Статья

Kovtunov E.A., Shkodenko L.A., Goncharova E.A., Nedorezova D.D., Sidorenko S., Koshel E.I., Kolpashchikov D.M. Towards Point of Care Diagnostics: Visual Detection of Meningitis Pathogens Directly from Cerebrospinal Fluid. Chemistryselect. 2020. Vol. 5. No. 46. pp. 14572-14577.

Тезисы

БИВАЛЕНТНЫЕ ДНК-УСТРОЙСТВА ДЛЯ ИНГИБИРОВАНИЯ СПЕЦИФИЧНЫХ РНК ДЛЯ ТЕРАПИИ РАКА// СБОРНИК ТЕЗИСОВ VII МЕЖДУНАРОДНОЙ КОНФЕРЕНЦИИ МОЛОДЫХ УЧЕНЫХ: БИОФИЗИКОВ, БИОТЕХНОЛОГОВ, МОЛЕКУЛЯРНЫХ БИОЛОГОВ И ВИРУСОЛОГОВ // ПЛОЩАДКА ОТКРЫТЫХ КОММУНИКАЦИЙ «OPENBIO 2020»

Статья

Горбенко Д.А., Шкоденко Л.А., Мальцева Ю.И., Рубель М.С., Штро А.А., Зарубаев В.В., Слита А., Колпащиков Д.М. Пероксидазоподобные дезоксирибозимы для детекции бактериальных и вирусных патогенов. Современные достижения химико-биологических наук в профилактической и клинической медицине: сборник научных трудов Всероссийской научно-практической конференции с международным участием (СПб, 3декабря 2020г.). 2020. Т. Часть 1. С. 253-259.

Тезисы

Visual detection of pathogenic bacteria with peroxidase-like deoxyribozymes

Тезисы

Бинарный сенсор для быстрых обнаружения и идентификации близкородственных видов микроорганизмов по рРНК на основе каталитического расщепления молекулы молекулярного маяка дезоксирибозимом 10-23

Тезисы

Визуальная детекция бактериальных патогенов с использованием пероксидазо-подобных дезоксирибозимов

Статья

Gomes de Oliveira A., Dubovichenko M.V., Vandzhoi D., Kolpashchikov D.M. RNA cleaving DNA Thresholder Controlled by Concentrations of miRNA Cancer Marker. ChemBioChem. 2020. pp. n/a.

Статья

Chalenko K.P., Rotkevich M.S., Kolpashchikov D.M., Koshel E.I. Target selection protocol for DNA-machines development. BMC bioinformatics. 2019. Vol. 20. No. Suppl.1(SI). pp. 516.

Статья

Nedorezova D.D., Fakhardo A.F., Nemirich D.V., Bryushkova E.A., Kolpashchikov D.M. Towards DNA Nanomachines for Cancer Treatment: Achieving Selective and Efficient Cleavage of Folded RNA. Angewandte Chemie - International Edition. 2019. Vol. 58. No. 14. pp. 4654-4658.

Статья

Kolpashchikov D.M., Bakshi S., Zakharchenko A., Minko S., Katz E. Towards nanomaterials for cancer theranostics: A system of DNA-modified magnetic nanoparticles for detection and suppression of RNA marker in cancer cells. Magnetochemistry. 2019. Vol. 5. No. 2. pp. 24.

Статья

Kolpashchikov D.M., Kikuchi N., Reed A., Gerasimova Y.V. Split Dapoxyl aptamer for sequence-selective analysis of nucleic acid sequence based amplification amplicons. Analytical Chemistry. 2019. Vol. 91. No. 4. pp. 2667-2671.

Статья

Kolpashchikov D.M., Sun S., Dou H., Chuang M. Multi-labeled electrochemical sensor for cost-efficient detection of single nucleotide substitutions in folded nucleic acids. Sensors and Actuators, B: Chemical. 2019. Vol. 287. pp. 569-575.

Статья

Kolpashchikov D.M., Mills D.M., Foguel M.V., Martin C.P., Trieu T.T., Kamar O., Calvo-Marzal P., Chumbimuni-Torres K.Y. Rapid detection of different DNA analytes using a single electrochemical sensor. Sensors and Actuators, B: Chemical. 2019. Vol. 293. pp. 11-15.

Тезисы

ДЕТЕКЦИЯ ДВУХЦЕПОЧЕЧНОЙ ДНК MYCOBACTERIUM TUBERCULOSIS С ПОМОЩЬЮ ДНК-НАНОМАШИН

Тезисы

Биосенсоры на основе G-квадруплексов как функциональный модуль в комплексном устройстве для быстрой детекции патогенов

Тезисы

Deoxyribozyme-based gene therapy agents against Coxsackievirus

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Detection Of Double-Stranded Mycobacterium Tuberculosis Using Dna Nanomachine Based On Binary Deoxyribozyme Sensors

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DNA nanomachine suppressing the reproduction of Coxsakievirus B3 // Book of abstract of the second International school-conference for young researchers Smart Nanosystems for Life

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Development of deoxyribozyme DNA nanomachines for diagnostics and therapy

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Synthesis of nucleoside analogs for inhibition of HIV-1 RT

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The smart DNA-based biosensor as a new method for mRNA in vitro detection

Тезисы

ОПТИМИЗАЦИЯ ДЕЗОКСИРИБОЗИМОВ ДЛЯ РАСЩЕПЛЕНИЯ ГЕНА ДОМАШНЕГО ХОЗЯЙСТВА DAD1

Статья

Lyalina T.A., Goncharova E.A., Prokofeva N.Y., Voroshilina E., Kolpashchikov D.M. A DNA Minimachine for Selective and Sensitive Detection of DNA. Analyst. 2019. Vol. 144. No. 2. pp. 416-420.

Статья

Reed A., Nedorezova D., Kikuchi N., Kolpashchikov D., Gerasimova Y. Real time monitoring of NASBA reaction using split hybridization probes. Abstracts of Papers of the American Chemical Society. 2019. Vol. 257. pp. 34.

Статья

Kolpashchikov D., Nedorezova D., Spelkov A., Roldan C., Amanda C. Development of deoxyribozyme DNA nanomachines for diagnostics and therapy. Abstracts of Papers of the American Chemical Society. 2019. Vol. 257. pp. 161.

Тезисы

Детекция двухцепочечной ДНК Mycobacterium tuberculosis с помощью ДНКнаномашин (Ломоносов 2019)

Тезисы

Детекция двухцепочечной ДНК Mycobacterium tuberculosis с помощью ДНКнаномашин (КМУ)

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The First DNA-Machines Against Antibiotic Resistant Bacteria

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Target selection protocol for DNA-machines development

Тезисы

СОЗДАНИЕ ТЕСТ-СИСТЕМЫ С ИЗОТЕРМИЧЕСКОЙ АМПЛИФИКАЦИЕЙ ДЛЯ ДЕТЕКЦИИ ПАТОГЕНОВ ЦНС В КЛИНИЧЕСКИХ ОБРАЗЦАХ

Тезисы

Aptamer-Based Sensors for RNA Detection

Тезисы

Target selection protocol for DNA-machines development

Статья

Karadeema R.J., Stancescu M., Steidl T.P., Bertot S.C., Kolpashchikov D.M. The owl sensor: A 'fragile' DNA nanostructure for the analysis of single nucleotide variations. Nanoscale. 2018. Vol. 10. No. 21. pp. 10116-10122.

Тезисы

DNA Nanomachine: New Approach for Cancer Treatment

Статья

Bakshi S.F., Guz N., Zakharchenko A., Deng H., Tumanov A.V., Woodworth C.D., Minko S., Kolpashchikov D.M., Katz E. Nanoreactors based on DNAzyme-functionalized magnetic nanoparticles activated by magnetic field. Nanoscale. 2018. Vol. 10. No. 3. pp. 1356-1365.

Статья

Mills D.M., Martin C.P., Armas A.M., Calvo-Marzal P., Kolpashchikov D.M., Chumbimuni-Torres K. A universal and label-free impedimetric biosensing platform for discrimination of single nucleotide substitutions in long nucleic acid strands. Biosensors and Bioelectronics. 2018. Vol. 109. pp. 35-42.

Тезисы

Modeling of the DNA-nanodevices for inactivation of Influenza A Virus

Тезисы

Modeling and optimizing DNA-Nanodevices for the Inactivation of Ifluenza A Virus

Тезисы

Improvement of the deoxyribozymes 10-23 cleavage efficiency

Тезисы

Evolution of hybridization based-biosensors to DNA nanorobots for biosensing and gene therapy

Тезисы

Альтернативные подходы к терапии и детекции онкологических заболеваний

Статья

Evangelista B.A., Kim Y.S., Kolpashchikov D.M. FaptaSyme: A Strategy for Converting a Monomer/Oligomer-Nonselective Aptameric Sensor into an Oligomer-Selective One. ChemBioChem. 2018. Vol. 19. No. 11. pp. 1123-1126.

Тезисы

ДНК-нанороботы в клинической диагностике как способ обнаружения целевой РНК

Тезисы

Real time detection of NASBA product by Split DNA aptameric sensor

Тезисы

Real time detection of NASBA product by Split DNA aptameric sensor

Тезисы

Creating a DNA computer using five interconnected NAND gates with a half-adder function

Тезисы

dsDNA cleavage via deoxyribozyme DNA construct

Тезисы

An alternative to real-time PCR

Тезисы

Детекция одноцепочечной ДНК с помощью дезоксирибозимов

Тезисы

Development and Optimization DNA Platform for Suppressing Cancer Cells

Статья

dsDNA cleavage via deoxyribozyme DNA construct

Статья

Kolpashchikov D.M. Evolution of Hybridization Probes to DNA Machines and Robots. Accounts of chemical research. 2018. Vol. 52. No. 7. pp. 1949-1956.

Статья

Development and optimization DNA platform for suppressing cancer cells

Статья

Lanchuk Y.V., Ulasevich S.A., Fedotova T.A., Kolpashchikov D.M., Skorb E.V. Towards sustainable diagnostics: replacing unstable H2O2 by photoactive TiO2 in testing systems for visible and tangible diagnostics for use by blind people. RSC Advances. 2018. Vol. 8. No. 66. pp. 37735-37739.

Тезисы

DNA nanomachines for targeting nucleic acids in cancer cells

Статья

Kolpashchikov D.M., Smith A.L. Divide and control: comparison of split and switch hybridization sensors. ChemistrySelect. 2017. Vol. 2. No. 19. pp. 5427.

Статья

Kamar O., Sun S., Lin C., Chung W., Lee M., Liao Y., Kolpashchikov D.M., Chuang M. A mutation-resistant deoxyribozyme OR gate for highly selective detection of viral nucleic acids. Chemical Communications. 2017. Vol. 53. No. 76. pp. 10592-10595.

Тезисы

Molecular DNA-nanorobots for the influenza virus therapy

Статья

Kolpashchikov D.M., Gamella M., Zakharchenko A., Guz N., Masi M., Minko S., Iken H., Poghossian A., Schoning M.J., Katz E. DNA Computing Systems Activated by Electrochemically?triggered DNA Release from a Polymer?brush?modified Electrode Array. Electroanalysis. 2017. Vol. 29. No. 2. pp. 398-408.

Статья

Kolpashchikov D.M., Kikuchi N. A universal split spinach aptamer (USSA) for nucleic acid analysis and DNA computation. Chemical Communications. 2017. Vol. 53. No. 36. pp. 4977-4980.

Статья

Kolpashchikov D.M., Mills D.M., Calvo?Marzal P., Pinzon J.M., Armas S., Chumbimuni?Torres K.Y. A single electrochemical probe used for analysis of multiple nucleic acid sequences. Electroanalysis. 2017. Vol. 29. No. 3. pp. 873-879.

Статья

Kolpashchikov D.M., Bengtson H.N., Homolka S., Niemann S., Reis A., Da Silva P., Gerasimova Y.V., Rohde K.H. Multiplex detection of extensively drug resistant tuberculosis using binary deoxyribozyme sensors. Biosensors and Bioelectronics. 2017. Vol. 94. pp. 176-183.

Статья

Kolpashchikov D.M., Calvo-Marzal P., Chumbimuni-Torres K.Y. Nucleic acid detection using a universal electrochemical sensor for SNS differentiation. Revista ECIPeru Volumen. 2017. Vol. 14. No. 2. pp. 5-12.

Статья

Bakshi S.F., Guz N.V., Zakharchenko A., Deng H., Tumanov A.V., Woodworth C.D., Minko S., Kolpashchikov D.M., Katz E. Magnetic Field-Activated Sensing of mRNA in Living Cells. Journal of the American Chemical Society. 2017. Vol. 139. No. 35. pp. 12117-12120.

Тезисы

Translational Tools for Diagnostics and In Vivo Drug Testing of Non-Tuberculous Mycobacteria (NTM)

Статья

Kolpashchikov D.M., Campbell E.A., Peterson E. Self-Assembling Molecular Logic Gates Based on DNA Crossover Tiles. ChemPhysChem. 2017. Vol. 18. No. 13. pp. 1730-1734.

Тезисы

Translational Tools for Diagnostics and In Vivo Drug Testing of Non-Tuberculous Mycobacteria (NTM)

Статья

Kolpashchikov D.M. Nucleic Acid Analysis Using Multifunctional Hybridization Sensors. Multidisciplinary Digital Publishing Institute Proceedings. 2017. Vol. 1. No. 8. pp. 773.

Статья

Fedotova T.A., Kolpashchikov D.M. Liquid-to-gel transition for visual and tactile detection of biological analytes. Chemical Communications. 2017. Vol. 53. No. 94. pp. 12622-12625.