Райко Михаил Петрович

Статья

Volodarskiy M., Rayko M. The evolution of the Vibrio genome: the discovery of the pan-genome and the functional specialization of chromosomes. Molecular Genetics and Genomics. 2026. Vol. 301. No. 1. pp. 52.. doi: 10.1007/s00438-026-02381-8

Статья

Райко М.П., Rodionov A.V. Phylogenetic relationships of the genera Anthoxanthum, Ataxia, Hierochloe, and Phalaris (Poaceae). Новости систематики высших растений [Novosti Sistematiki Vysshikh Rastenii]. 2025. Т. 56. С. e08: 1–16.. doi: 10.31111/novitates/2025.56.08

Статья

Kravchenko I., Rayko M., Sokornova S., Tikhonova E., Konopkin A., Lapidus A. Analysis of rhizosphere fungal community of agricultural crops cultivated in laboratory experiments on Chernevaya taiga soil. World Journal of Microbiology and Biotechnology. 2024. Vol. 40. No. 1. pp. 27.. doi: 10.1007/s11274-023-03827-6

Статья

Meleshko D., Prjbelski A.D., Raiko M., Tomescu A., Tilgner H., Hajirasouliha I. CLOUDRNASPADES: isoform assembly using bulk barcoded RNA sequencing data. Bioinformatics. 2024. Vol. 40. No. 2. pp. btad781.. doi: 10.1093/bioinformatics/btad781

Статья

Mesentsev Y., Bondarenko N., Kamyshatskaya O., Nassonova E., Glotova A., Loiko S., Istigechev G., Kulemzina A., Abakumov E., Rayko M., Lapidus A., Smirnov A. Thecochaos is not a myth: study of the genus Thecochaos (Amoebozoa, Discosea) – a rediscovered group of lobose amoeba, with short SSU gene. Organisms Diversity and Evolution. 2024. Vol. 23. No. 1. pp. 7-24.. doi: 10.1007/s13127-022-00581-9

Статья

Yakupova A., Tomarovsky A., Totikov A., Beklemisheva V., Logacheva M., Perelman P.L., Komissarov A., Dobrinin P., Krasheninnikova K., Tamazian G., Serdyukova N.A., Rayko M., Bulyonkova T., Cherkasov N., Pylev V., Peterfeld V., Penin A., Balanovska E., Lapidus A., Dna Z., O’Brien S., Graphodatsky A., Koepfli K., Kliver S. Chromosome-Length Assembly of the Baikal Seal (Pusa sibirica) Genome Reveals a Historically Large Population Prior to Isolation in Lake Baikal. Genes. 2023. Vol. 14. No. 3. pp. 619.. doi: 10.3390/genes14030619

Статья

Lotonin K., Bondarenko N., Nassonova E., Rayko M., Smirnov A. Balamuthia spinosa n. sp. (Amoebozoa, Discosea) from the brackish-water sediments of Niva Bay (Baltic Sea, The Sound) — a novel potential vector of Legionella pneumophila in the environment. Parasitology Research. 2022. Vol. 121. No. 2. pp. 713–724.. doi: 10.1007/s00436-022-07425-7

Статья

Kravchenko I., Rayko M., Tikhonova E., Konopkin A., Abakumov E., Lapidus A. Agricultural crops grown in laboratory conditions on Chernevaya taiga soil demonstrate unique composition of the rhizosphere microbiota. Microorganisms. 2022. Vol. 10. No. 11. pp. 2171.. doi: 10.3390/microorganisms10112171

Статья

Antipov D., Rayko M., Kolmogorov M., Pevzner P.A. viralFlye: assembling viruses and identifying their hosts from long-read metagenomics data. Genome Biology. 2022. Vol. 23. No. 1. pp. 57.. doi: 10.1186/s13059-021-02566-x

Статья

Yutin N., Rayko M., Antipov D., Mutz P., Wolf Y.I., Krupovic M., Koonin E.V. Varidnaviruses in the Human Gut: A Major Expansion of the Order Vinavirales. Viruses. 2022. Vol. 14. No. 9. pp. 1842.. doi: 10.3390/v14091842

Статья

Bakin E., Sezer F., Ozbilen A., Kilic I., Uner B., Rayko M., Taskin K., Brukhin V. Phylogenetic and Expression Analysis of CENH3 and APOLLO Genes in Sexual and Apomictic Boechera Species. Plants. 2022. Vol. 11. No. 3. pp. 387.. doi: 10.3390/plants11030387

Статья

Benler S., Yutin N., Antipov D., Rayko M., Shmakov S., Gussow A.B., Pevzner P., Koonin E.V. Thousands of previously unknown phages discovered in whole-community human gut metagenomes. Microbiome. 2021. Vol. 9. No. 1. pp. 78.. doi: 10.1186/s40168-021-01017-w

Статья

Yutin N., Benler S., Shmakov S.A., Wolf Y.I., Tolstoy I., Rayko M., Antipov D., Pevzner P.A., Koonin E.V. Analysis of metagenome-assembled viral genomes from the human gut reveals diverse putative CrAss-like phages with unique genomic features. Nature Communications. 2021. Vol. 12. No. 1. pp. 1044.. doi: 10.1038/s41467-021-21350-w

Статья

Rayko M., Sokornova S., Lapidus A. Fungal Metagenome of Chernevaya Taiga Soils: Taxonomic Composition, Differential Abundance and Factors Related to Plant Gigantism. Journal of Fungi. 2021. Vol. 7. No. 11. pp. 908.. doi: 10.3390/jof7110908