Лобода Александр Александрович

Статья

Artomov M., Loboda A.A., Artyomov M.N., Daly M.J. Public platform with 39,472 exome control samples enables association studies without genotype sharing. Nature Genetics. 2024. Vol. 56. No. 2. pp. 327-335.

Статья

Pinakhina D., Loboda A., Sergushichev A., Artomov M. Gene, cell type, and drug prioritization analysis suggest genetic basis for the utility of diuretics in treating Alzheimer disease. Human Genetics and Genomics Advances. 2023. Vol. 4. No. 3. pp. 100203.

Статья

Atkinson E., Artomov M., Loboda A.A., Rehm H., Macarthur D., Karczewski K.J., Neale B.M., Daly M.J. Discordant calls across genotype discovery approaches elucidate variants with systematic errors. Genome Research. 2023. Vol. 33. No. 6. pp. 999-1005.

Тезисы

A platform for case-control matching enables association studies without genotype sharing

Статья

Nehme R., Pietilainen O., Artomov M., Tegtmeyer M., Valakh V., Lehtonen L., Bell C., Singh T., Trehan A., Sherwood J., Manning D., Peirent E., Malik R., Guss E., Hawes D., Beccard A., Bara A., Hazelbaker D., Zuccaro E., Genovese G., Loboda A.A., Neumann A., Lilliehook C., Kuismin O., Hamalainen E., Kurki M., Hultman C., Kahler A., Paulo J., Ganna A., Madison J., Cohen B., Mcphie D., Adolfsson R., Perlis R., Dolmetsch R., Farhi S., Mccarroll S., Hyman S., Neale B., Barrett L., Harper W., Palotie A., Daly M., Eggan K. The 22q11.2 region regulates presynaptic gene-products linked to schizophrenia. Nature Communications. 2022. Vol. 13. No. 1. pp. 3690.

Статья

Emelianova M., Gainullina A., Poperechnyi N., Loboda A.A., Artyomov M., Sergushichev A. Shiny GATOM: omics-based identification of regulated metabolic modules in atom transition networks. Nucleic Acids Research. 2022. Vol. 50. No. 1. pp. W690-W696.

Статья

Kolosov N., Rezapova V., Rotar O., Loboda A., Freylikhman O., Melnik O., Sergushichev A., Stevens C., Voortman T., Kostareva A., Konradi A., Daly M., Artomov M. Genotype imputation and polygenic score estimation in northwestern Russian population. PLoS ONE. 2022. Vol. 17. No. 6. pp. e0269434.

Тезисы

Polygenic Risk Score Estimation in North-Western Russian Population

Статья

Лобода А.А., Сергушичев А.А. Вывод генных регуляторных сетей по данным экспрессии генов при помощи байесовских сетей [Inferring of regulatory networks from expression data using bayesian networks]. Научно-технический вестник информационных технологий, механики и оптики [Scientific and Technical Journal of Information Technologies, Mechanics and Optics]. 2020. Т. 20. № 6(130). С. 835-840.

Статья

Artomov M., Loboda A.A., Artyomov M., Daly M. A platform for case-control matching enables association studies without genotype sharing. BioRxiv [база препринтов]. 2019. pp. 1-26.

Тезисы

Algorithm for gene regulatory network inference recovers biological insights from large-scale gene expression data (Abstract/Program #1426). Presented at the 69th Annual Meeting of The American Society of Human Genetics, October 18, Houston.

Тезисы

Public platform with 42,291 exome control samples enables association studies without genotype sharing (Abstract/Program #98). Presented at the 69th Annual Meeting of The American Society of Human Genetics, October 17, Houston.

Тезисы

Определение структуры генной регуляторной сети по профилям экспрессии генов

Статья

Isomurodov J.E., Loboda A.A., Sergushichev A.A. Ranking Vertices for Active Module Recovery Problem. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2017. Vol. 10252. pp. 75-84.

Статья

Ulland T.K., Song W., Huang S.C., Ulrich J.D., Sergushichev A.A., Beatty W.L., Loboda A.A., Zhou Y., Cairns N.J., Kambal A., Loginicheva E., Gilfillan S., Cella M., Virgin H.W., Unanue E.R., Wang Y., Artyomov M.N., Holtzman D.M., Colonna M. TREM2 Maintains Microglial Metabolic Fitness in Alzheimer's Disease. Cell. 2017. Vol. 170. No. 4. pp. 649-663.e13.

Статья

Loboda A.A., Artyomov M.N., Sergushichev A.A. Solving generalized maximum-weight connected subgraph problem for network enrichment analysis. Lecture Notes in Computer Science (including subseries Lecture Notes in Artificial Intelligence and Lecture Notes in Bioinformatics). 2016. Vol. 9838. pp. 210-221.

Статья

Sergushichev A.A., Loboda A.A., Jha A.K., Vincent E.E., Driggers E.M., Jones R.G., Pearce E.J., Artyomov M.N. GAM: a web-service for integrated transcriptional and metabolic network analysis. Nucleic Acids Research. 2016. Vol. 44. No. 1. pp. W194-W200.